Q&A with Johns Hopkins neuroscientist David Linden, on the science of human individuality and his book ‘Unique’ – – Baltimore Fishbowl

As of this writing, there are give or take 7,815,637,687 human beings living on planet Earth. This staggeringly large number is made even more unfathomable by the fact that each one of us is unique in the particular combination of features that make us, well, us.

How we become the individuals we become is the fascinating question that Johns Hopkins Neuroscience professor David J. Linden explores in his latest book Unique: The New Science of Human Individuality. It is a big question, and Linden tackles not only the roles that genetics and experience play in shaping who we are, but also the varieties of human experiences found in traits ranging from food and sexual preference to gender and race and more.

Though covering this vast topic in 256 pages may seem daunting, Linden is an experienced communicator of complex science having previously authored three highly successful books on neuroscience for a general audience (Touch,The Accidental Mind, andThe Compass of Pleasure) and edited a book of essays written by fellow neuroscientists (Think Tank). (He also teaches a course at Johns Hopkins University on writing about the brain that I took as a graduate student.)

Unique emphatically pushes beyond outdated notions of individuality as being the simple byproduct of nature vs nurture and instead offers a vision that is both more complex and awe-inspiring.

Were actually a collection of thirty-seven trillion cells, each with a somewhat different genome. Thats pretty hard to imagine, he writes. Its not just that it takes a village to raise a child. Each child is a villageor rather, a huge metropolisof related but genetically unique individual cells. But it gets even more complicated.

By deftly weaving in historical vignettes and anecdotes from his own life with clear explanations of scientific findings and research methodologies, Linden writes about our current understanding of individuality in a way thats both personal and universal perfectly reflecting our experience of being an individual.

BFB: Why did you decide to write about human individuality?

David J. Linden: I got the idea to write about human individuality when I found myself single five years ago and started online dating. So, there I am on OkCupid. And, you know, reading all these profiles of these various women and theyre basically lists of traits. When people are trying to describe themselves, theyre listing traits. Theyre saying things like I tend to wake up early in the morning. I like white chocolate, I like hoppy beer, and I have perfect pitch.

So if youre a nerd like me, you begin to wonder well, whats the deal? How do these traits come to pass? And can we really think about it in terms of the classic formulation of nature versus nurture?

BFB: I love your extended rant [in the book] about the expression nature versus nurture. Whats so wrong about that phrase? And why do you think its really stuck in the popular imagination?

DJL: I think its stuck because its cute to say. It rhymes and has a good beat you can dance to it. Its like if the gloves dont fit, you must acquit. Its one of the things that sticks in your mind.

A minor thing is you say nature to mean heredity. Well, alright, Ill go along with that, whatever. And then the problem is all the things that are not heredity are then nurture, but nurture means how your parents and your community raised you. And of course, those are important factors, but theyre far from the whole deal. Not only are there very many other social experiences, other than in the family or community, but theres all these experiences that arent social at all, like whether your mother was fighting off influenza while she was pregnant with you, what food she ate, and the day length and the latitude where you grew up in the first two years of your life.

And theres versus. Versus is stupid because it makes you think you got heredity and you got experience, [and] you can either have more of one or the other. And in truth, they interact enormously. Like, if youre fortunate enough to be born fast and coordinated, then youll probably like sports and then youll probably practice sports and play sports a lot and get better at sports.

And the final thing is that theres a huge bit missing to all this. When genetically identical twins are born, they basically got the same DNA. And they have more or less the same experience in the womb up to that point side by side. And theyre born and theyre not really identical, either in appearance, or the volume of their organs or temperament? One can be mellow and the other fuss. It happens all the time.

BFB: What was the most surprising thing youve learned about human individuality while researching the book? Because you have so many tidbits in there.

DJL: I think the thing that was the most surprising and counterintuitive to me has to do with the effects of birth order in the family. I had always sort of bought into this idea that firstborn children, because of their role in the family, tend to be leaders, innovators, risk-takers, while your middle borns are more negotiators, andyour later borns are kind of clever, avoid-the-police types used to avoiding parents who at that point are really distracted. And remarkably, this turns out to be true only within the dynamic of the family. Its absolutely true. Firstborns really do dominate their younger siblings, and the middle kids really do negotiate. And the youngest kids really, really do try to be clever and sneak around. But when they go out into the world, that all falls apart. And in a way, it makes total sense. Because you may be the firstborn, you may be the big fish in the pond in your family, but on the playground, youre almost certainly not. Kids are very good at matching the situation.

So that was a big shock to me that birth order really doesnt predict personality other than within the dynamics of the family.

BFB: What would you say is the takeaway for the readers of this book?

DJL: I would say one of them is to revise the nature versus nurture formulation. But another one, I think, has to do with personal agency.

A lot of people say, Well, if Im admitting that theres heritable contributions to behavioral traits, that turns me into a robot. Im a slave of my genes.

And thats not true.

That said, way more of what we do in an average day is habitual than we realize. Adrian Haith, at Hopkins famously said, were a big pile of habit with a thin veneer of decision-making on top of it, and I think hes right.

But whats also interesting is that it doesnt feel that way, right? It feels like we are driving the bus, each of us are in charge: I can go here, I go there, I can change my mind, I can do this, I can do that. What is he mean Im a big pile of habit? So to me, an interesting question that comes out of this is then, why is it useful?

Why should people feel like they have more of a sense of agency than they really do? I dont really know the answer. But my speculation is that you need that to not be stymied when you need to make rapid decisions. You know, if the tiger is chasing you dont have to go, Oh, can I really trust my senses here? What should I do? Am I really in charge? I think you have to have enough of a sense of personal agency to act rapidly.

***

The virtual launch of Unique features Baltimore Fishbowl columnist Marion Winik in conversation with David Linden, sponsored by the Ivy Bookshop, Sunday, October 11, 6:30 pm. To register to attend the event, go to the Ivys event page.

Richard Sima is a science writer based in Baltimore, Md. He covers the environmental and life sciences and has written for Scientific American, Discover, New Scientist, and elsewhere. He has a Ph.D. in neuroscience from Johns Hopkins University and an undergraduate degree in neurobiology from Harvard College.

View post:
Q&A with Johns Hopkins neuroscientist David Linden, on the science of human individuality and his book 'Unique' - - Baltimore Fishbowl

Biochemistry to boost garlic breath and canine COVID-19 detection – Chemical & Engineering News

Good news for garlic lovers

Booster of flavor, repeller of vampires, stinker of breath. Garlic has enhanced our cooking for thousands of years by adding different flavorful sulfur-containing compounds to our dishes. The punchy allium has also been a folk remedy for infections, including plagues and other medical complaints, for almost as long. But even with all we know about it, the humble garlic clove is still giving up some sulfurous secrets.

At Virginia Tech, graduate student Hannah Valentino has picked apart a previously unknown pathway to one of the key flavor compounds in garlic, allicin (J. Biol. Chem. 2020, DOI: 10.1074/jbc.RA120.014484). Allicin is the flavorful compound with a characteristic smell thats released when you cut or crush raw garlic. Somewhat unstable, allicin will break down over time, or with cooking, to create the other smelly compounds that many people find alluring in food but less so on the breath.

Trying to understand the biosynthesis of this stinky compound, Valentino found an enzyme that oxygenates allyl mercaptan to form allyl sulfenic acid. Two molecules of the allyl sulfenic acid then condense to form allicin.

In a press release about the paper, Valentinos mentor Pablo Sobrado suggests that understanding how the enzyme creates garlicky flavor compounds could help researchers develop new garlic breeds with different allicin levels. That could help farmers grow garlic they know will have a receptive audience: consumers in the future could buy garlic bulbs with levels of the flavorful compound that suit their tastes.

For now, though, if you are more worried about stinky breath than keeping vampires away, Harold McGees On Food and Cooking: The Science and Lore of the Kitchen may help. Residual thiols in the mouth, McGee writes, can be transformed into odorless molecules by the browning enzymes in many raw fruits and vegetables. His adviceeating a salad or apple should remove garlics offensive odors from your exhalations.

While we know a lot about the smell of garlic, researchers still havent pinned down the source of the novel coronaviruss scent. But airports are now using scent-trained canines for dog-based diagnostics.

In July, Newscripts reported that researchers were having success training doggy detectives to sniff out people infected with COVID-19. But those tests were in the lab and based mostly on smelling urine or saliva from infected people. Not ideal for day-to-day testing in a public setting.

The article prompted a representative from the United Arab Emirates Ministry of Interior to contact Newscripts via email. Since August, the note says, scent-detecting dogs have been sniffing out COVID-19 at airports, including in the busy hub of Dubai. Instead of taking saliva samples, which might be infectious, medical assistants at the UAE airports take sweat samples for dogs to sniff, which the representative says are completely safe for both the dogs and the medical assistants who are administering the test. In late September, COVID-19-detecting doggos started working at Helsinkis airport, where they are also sniffing swipes from passengers skin rather than the passengers themselves.

It still isnt clear exactly what combination of metabolites and scent molecules gives people infected with SARS-CoV-2 their distinctive scent. But Newscripts hopes that researchers can find that elusive eau de COVID-19. Until that is figured out, were glad these pooch sleuths are helping out and we hope these good puppers get lots of treats at the end of a tough day at the office. That always works for the Newscripts gang.

Read more here:
Biochemistry to boost garlic breath and canine COVID-19 detection - Chemical & Engineering News

Li-Jun Ma Receives Joint Genome Institute Award for Fungi Research – UMass News and Media Relations

Professor Li-Jun Ma, biochemistry and molecular biology, has received support from the U.S. Department of Energys Joint Genome Institute (JGI) Community Science Program (CSP) to conduct in-depth research on a group of soil fungi, Fusaria, that are economically important because they devastate crops not only food but biofuel feedstocks. This is a collaborative project between principal investigator Ma and co-principal investigator Robert Proctor, a research microbiologist at the USDA Agricultural Research Services National Center for Agricultural Utilization.

Ma says that two of the top 10 plant pathogens are in the Fusariumfamily, based on a ranking by many molecular plant pathologists. For these new investigations, she will collaborate with Igor Grigoriev and his team at the Joint Genome Institute and Lawrence Berkeley National Laboratory. Other collaborators include evolutionary biologist David Geiser,director of the Fusarium Research Center at Penn State University; Kerry ODonnell, an expert on taxonomy and biological diversity of Fusarium; and Daren Brown, who has more than 20 years of experience in Fusarium research.

She says of the honor and opportunity, This is an exciting project. Im honored by this award and I always appreciate the consistent and reliable support from JGI to the research community.

The JGI CSP program provides the scientific community with access to high-throughput, high-quality sequencing, DNA synthesis, metabolomics and analysis capabilities that they might not otherwise have access to. For this project, JGI will allocate technical infrastructure support, such as characterizing 124 fungal samples via next-generation, long-read DNA and RNA sequencing techniques, according to the institute.

DOE also points out that because of their associations with plants, Fusariumspecies (fusaria) can profoundly impact bioenergy production and global carbon cycling. The great genetic diversity of the genus is also reflected in their genomes and there is a great interest in understanding the dynamics of Fusariumgenomes and their impacts on the host-plant interactions.

This funded project has two major components. One is to produce 50 high-quality genome assemblies that span the diversity in the genus. Im happy that the scope of the project covers the whole genus. Further, the scientists will also explore the functional impact of genome dynamics on Fusarium-plant interactions by investigating 96 transcription factors identified in Fusarium oxysporum using DNA affinity purified sequencing (DAP-seq) and single cell RNAseq of three carefully selected samples. I am excited by the opportunity to address some knowledge gaps using functional data to probe host-fungal interactions, Ma says.

This project is based on a system developed at the Ma lab enabling the dissection of interaction between Fusarium and plants in both harmful and beneficent ways. Ma explains that another facet of this work will involve isolating individual plant cells and sequencing each cell separately, which is a cutting-edge and highly informative technique not easily used in non-human biology studies. Through network analysis, researchers will be able to capture the action and characterize patterns of temporal and spatial fungal-plant interactions. One goal of this research is to seek ways to intervene to prevent the plants death, specifically to prevent the loss of plant-based biofuel feedstocks.

Read the original post:
Li-Jun Ma Receives Joint Genome Institute Award for Fungi Research - UMass News and Media Relations

Anatomy and Physiology – Visual introduction to each human …

Anatomy and physiology presented in 3D model sets, 3D animations, and illustrations

Each unit presents a body system in a series of chapters, withbite-sized visual interactivities and quizzes

Trackable unit objectives with multiple-choice and dissection quizzes for assessing self-paced learning

12 units: cells and tissues, integumentary, skeleton and joints, muscle types, nervous, endocrine, circulatory, lymphatic, respiratory, digestive, urinary, and reproductive

Here is the original post:
Anatomy and Physiology - Visual introduction to each human ...

The Anatomy of GenEluteTM-E Single Spin DNA and RNA Purification – The Scientist

Silica-based DNA and RNA purification protocols, with all their spins and washes, can be tedious. GenEluteTM-E technology uses negative chromatography to absorb and retain contaminants in a column while nucleic acids flow through. When combined with SmartLyseTM extraction reagents, purified nucleic acids can be prepared for downstream analysis in no time at all.

Download this infographic to discover how it all works!

Better results, fewer steps. Learn more at http://www.sigmaaldrich.com/singlespin

See the original post here:
The Anatomy of GenEluteTM-E Single Spin DNA and RNA Purification - The Scientist

Anatomy of a second wave | Business Post – Business Post

Marie Casey recently dealt with a case where one man with Covid-19 led to the infection of 56 people in total. As a public health specialist in the mid-west region and a member of the Public Health Early Career Network, she is concerned not only about rising Covid-19 infections, but the complexity of the cases she is coming across.

The case involving 56 people started when a man returned home to the mid-west with mild Covid-19...

The rest is here:
Anatomy of a second wave | Business Post - Business Post

Greys Anatomy Reveals Somber First Look At Grey Sloan Facing The Pandemic – CinemaBlend

That looks so very intense. The doctors are seen wearing masks around Grey Sloan, but it also looks like theyre decked out in more protective gear like fluid-resistant gowns, full face shields and head covers that are attached to powered, air-purifying respirators (PAPR). The latter is worn by hospital staff when specifically dealing with very sick patients who need extended care. The PAPR is used to filter out contaminated air so that the doctors remain safe while around patients with COVID-19. Talk about realistic.

See the original post:
Greys Anatomy Reveals Somber First Look At Grey Sloan Facing The Pandemic - CinemaBlend

Anatomy of a Play: Did the Patriots Really Double Team the Raiders Checkdowns in Week 3? – raidersbeat.com

There has been a lot of talk surrounding the Raiders 36-20 loss to the Patriots in week 3. In particular, many have focused on a defensive play call by New England Patriots Head Coach, Bill Belichick.

The play was first noticed by @TheMarcJohnNFL.

They were double-teaming the check-downs LOL Belichicks a damn genius I never have seen a defense do this before. pic.twitter.com/vQIGiDJchM

Marc is a hard working journalist and his keen eye provided some seriously needed comic relief after a stinging 36-20 defeat at the hands of a much reviled opponent. It also provided some ammunition for those looking to disparage the Raiders offense. While there were certainly some aspects of the teams performance that deserve and should be critiqued, the criticism over this clip isnt one.

The play in question is shown below.

After watching this play, it is understandable why viewers would think that this is a double-team on Raiders running back Jalen Richard. However, like many things in Bill Belichicks scheme, not everything is always what it seems. This wasnt a cognitive choice by the Patriots to take away the checkdown. It actually wasnt even a double team. Lets break down the play to see why.

To understand this clip, we first have to touch on Belichicks system. His Pattern Match coverage is exactly what the name suggests. Its coverages match the pattern of the receivers routes, which Belichick calls the Route Distribution. At their core, Belichicks coverages are designed to put his defensive backs into the best leverages possible against route distribution.

Now his system is a little complex, but for the purpose of this article we will just focus on the basics of those leverages to understand the play call we are studying. Well start with a simple look at how normal man coverage would cover the Slant / Flat concept in this diagram.

As this diagram shows, the X receiver is running a slant while the Y is running a flat route. The cornerback ( C ) covers the slant inside while the slot corner ( SC ) covers the flat outside. You can see how this route distribution could lead to either receiver getting a leverage advantage on the corners while also having open space to run after the catch.

A concept like this would also have coaching points instructing one of the receivers to attempt to Rub ( pick ) one of the defensive backs, freeing the other receiver of their coverage. Fans will certainly recognize those pick plays because they happen every weekend. These types of leverage disadvantages are a weakness of basic man coverages.

One the positive side, there isnt much that can go wrong from a mental standpoint. At its core, the coverage identifies a receiving target and the cornerback simply follows him everywhere he goes. That is an oversimplification because there is a lot of detail involved, but it is on a more individual level. Now lets check out how Belichicks system would cover that same concept.

As you can see, they would be in much better position to cover these routes. Without getting into the rules of the scheme, the releases of these routes would tell both corners to switch off coverage responsibilities. The main takeaway is that while the secondary lines up within a coverage, their individual coverage responsibilities change depending on the route distribution. This is how Belichick gets his defensive backs into excellent leverage against most route concepts that the offense throws at them.

That focus on leverage advantages isnt limited to the receivers at the line of scrimmage, which brings us back to our play. We have all seen a running back release out into the flat, or for a screen, while a linebacker has to sprint across the field in an attempt to cover them. Belichick has an answer for that as well which he calls Funnel. Here is what it looks like.

To prevent that linebacker from having to run across the field while attempting to navigate the traffic in his way, Belichick will give some of his defenders multiple responsibilities. Again though, the final responsibilities are based entirely on the route distribution.

In the diagram above, if the running back ( H ) releases out to the left, the Sam ( S ) backer would play him in man coverage. The Mike ( M ) would then drop into zone coverage. Should the H release to the right, the Mike would play him in man coverage while the Sam plays zone. I cant state enough that while both of the linebackers are keyed on the running back, at no point are they both covering him. This is a basic design in Belichicks defense and one that was involved in our play. Here is a look at the defensive responsibilities.

The two defenders ( Black ) keyed on Richard are going to read his release. Should he break outside, the defender in the flat would cover him. If he goes inside, the defender on the hash marks would cover him. What transpires is comical but for a far different reason.

Here is the route distribution.

Richard is actually going to hook up at about 3 yards. The fact that he doesnt break inside or outside freezes the defensive backs and they arent quite sure how to play him. After a second or two, the outside defender gives up and rushes Carr.

This was either a designed 5-man pressure with the Funnel player that would typically drop into zone being the 5th rusher, or this was a blown coverage. Either way, it wasnt a designed double team on Jalen Richard.

Here is that play again.

If nothing else, hopefully this sheds a little light on why Belichick defenses can appear so simple, but are very complex. He doesnt simply stumble into excellent defensive units year after year.

As for the Raiders, they actually moved the ball reasonably well against the Patriots on Sunday, especially considering how many key offensive players werent on the field.

Derek Carr and company wont get much of a break this week with the Buffalo Bills coming to town. Certainly the Bills secondary will bring more than enough challenges for the Raider offense, but thankfully the one Bill that wont be on the Buffalo sideline on Sunday is the one named Belichick.

Twitter: @ChrisReed_NFL

Cover Image Credit: Raiders.com

Go here to see the original:
Anatomy of a Play: Did the Patriots Really Double Team the Raiders Checkdowns in Week 3? - raidersbeat.com

Virtual Cadaver Table Advancing Education at Union – Union College News

Its been featured on PBS, TEDTalks and numerous other journals; now a virtual anatomy table used by the worlds leading medical schools and institutions can be found at Union College.

The Anatomage Table, which arrived on campus Thursday, is the first life-size virtual dissection table of its kind and allows students to visualize anatomy exactly as they would if they were looking at the real thing.

(photo from Anatomage)

This technology provides an experience that is very unique the table displays images of real human anatomy and is so detailed that you can examine skin, veins, arteries, and even organs, says Dr. Marisa Greer, Vice President of Academic Affairs.

The college says they have had their eyes on the table since 2015 and it was finally made possible thanks to funding from the Good Samaritan Foundation, Inc., a ministry of the Kentucky Annual Conference of the Unite Methodist Church, combined with a matching donation from Union alumni Dr. Phillip and Anne Sharp.

We are so very grateful to Union alums Dr. Phillip and Anne Sharp and the Good Samaritan foundation whose support made possible this extraordinary teaching tool, says Union College President Marcia Hawkins, Ph.D.

Union is eager to blendthe table in with their current curriculum, allowing for greater opportunity for students there.

"Images can be rotated in all directions providing a 360 degree view which really allows us to bring our textbooks to life," adds Greer.

The table will be utilized by faculty and students in the health and biology programs which includes but is not limited to; nursing, athletic training, exercise science, health promotion, anatomy and physiology courses.

[Disclaimer: The views expressed herein do not necessarily represent those of the Good Samaritan Foundation, Inc.]

Go here to see the original:
Virtual Cadaver Table Advancing Education at Union - Union College News

Bare Anatomy packs a punch with personalised skin and hair care products – The New Indian Express

One-size-fits-all doesnt work today. And customers know that well. They seek solutions suited for their specific needs. This development has seen the emergence of several players in the segment of personalisation in skin and hair care. This is expected to only increase. Conventional diktats of ideal beauty are being broken ruthlessly. Especially those based on the perfect skin colour, body shape and age are being sprung out of the window.

Science takes over for better health standards New entrants are using technology to secure a grassroots level understanding of the unique needs and formulations of products after factoring in relevant data on external factors like location and lifestyle. This data is then analysed by scientists and proprietary algorithms to offer a precise solution to the specific problem faced by the customer.

By receiving the exact ingredients that we require basis our type, we can avoid exposure to harmful chemicals. Transparently handpicked clean ingredients Personalised beauty brands conduct their diligent research, selecting only the most effective and suitable ingredients based on ones unique profile. Most brands are now going the extra mile to ensure the highest level of clean products by eliminating potentially irritating ingredient. Toxin-free beauty products have proved to be extremely beneficial for the health of skin or hair.

For the girl whos not on the posters Most brands suit mass interest. But increasingly, many are jumping onto the bandwagon of personalisation to change that and attain the highest degree of exclusivity.Cleaning up the industry A few brands are amalgamating personalisation with sulfate and paraben-free clean formulations and sustainable packaging to bring the best-in-class products.While personalisation may seem like a luxury, it is something that is turning the skin and hair care industry on its axis for the better. Treating people as individuals and not as a number is going a long way in recognising that the cookie-cutter approach is pass.The author is CEO and Founder, Bare Anatomy

Originally posted here:
Bare Anatomy packs a punch with personalised skin and hair care products - The New Indian Express