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April: genetics-network | News and features – University of Bristol

It has been announced today [19 April] that the University of Bristol will be joining a new MRC national genetics network for disease modelling comprising 7 challenge-led research clusters, with members distributed across the UK.

The MRC National Mouse Genetics Network is a major new 22 million investment in mouse genetics for disease modelling that will capitalise on the UKs excellence in the biomedical sciences.

The Mary Lyon Centre at MRC Harwell will act as the central hub of the Network, sharing access to specialist facilities, resources, data, and training with all other Network members, and is receiving 5.5 million to support this role. The partnerships established by the Network will enable integration of basic science research with clinical findings in order to accelerate our understanding of human disease and translation to patient benefit.

The seven cluster themes are: Cancer, led by Prof Karen Blyth at the CRUK Beatson Institute/University of Glasgow and Prof Louis Chesler at the Institute of Cancer Research, Congenital Anomalies, led by Prof Karen Liu at Kings College London, Degron Tagging, led by Dr Andrew Wood at the MRC Human Genetics Unit at the University of Edinburgh, Haem, led by Dr David Kent at the University of York, Microbiome, led by Prof Fiona Powrie at the University of Oxford, Mitochondria, led by Dr Robert Pitceathly at the UCL Queen Square Institute of Neurology, and MURIDAE (Modalities for Understanding, Recording and Integrating Data Across Early life), led by Prof Anthony Isles at the MRC Centre for Neuropsychiatric Genetics and Genomics at Cardiff University.

Dr Michael Ashby from University of Bristols School of Physiology, Pharmacology & Neuroscience is a member of the MURIDAE (Modalities for Understanding, Recording and Integrating Data Across Early life) cluster. This cluster is receiving 2.7 million of MRC investment, which aims to establish new approaches for studying the early postnatal period in mouse models of neurodevelopmental and neuropsychiatric disease. The key to this will be linking changes in behaviour in early life with changes in brain development through integration of home-cage behavioural monitoring data with measures of brain structure and physiology, all guided by clinical partners to ensure relevance to human disease.

University of Bristol labs will play a key role in testing how brain activity is altered in the next-generation mouse models of neurodevelopmental disorders like schizophrenia and autism. Dr Michael Ashby, who leads Bristols part in the Network, said: Integrating the well-established expertise of Bristol Neuroscience researchers with this new national organisation will not only drive fresh insight into the ways that the young brain is altered in genetically-driven psychiatric disorders, but will also provide a platform for future collaborations for many years to come.

Owen Sansom, Network Director, said: Were excited to announce this first set of research clusters forming the MRC National Mouse Genetics Network and to synergising our efforts to deliver impactful preclinical science through comprehensive sharing of data, resources, and expertise.

By building connections between researchers working in such diverse fields and through development of comprehensive data-sharing infrastructure, the Network will create a platform that better links mouse genetics research to clinical advances.

For more information about each of the clusters, visit the MRC website.

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April: genetics-network | News and features - University of Bristol

Familial Hypertension: The Genetics of High Blood Pressure – Healthline

High blood pressure means the force of blood flowing through your arteries is greater than it should be. If not controlled, it could damage your blood vessels and cause other health problems.

High blood pressure (hypertension) tends to be a condition we associate with being too sedentary or getting older. But high blood pressure can also be a genetic condition, affecting people who are otherwise fit and healthy.

A parent with high blood pressure can pass along a gene to a child, raising that persons risk of developing hypertension one day. Familial hypertension may also result from a family lifestyle that includes high blood pressure risk factors, such as smoking or an unhealthy diet.

Blood pressure is the force of circulating blood against the inner wall of your arteries. Its measured in millimeters of mercury (mm Hg) and is presented as two numbers:

According to the American Heart Association, healthy blood pressure is a systolic pressure of less than 120 mm Hg and a diastolic pressure of less than 80 mm Hg. This is a blood pressure of less than 120/80 mm Hg.

If your blood pressure is higher than that, doctors consider you to have elevated blood pressure or stage 1 or 2 hypertension.

Risk factors for high blood pressure include a family history of hypertension, as well as:

What makes high blood pressure so dangerous is that it can exist for a long time without presenting any obvious symptoms. Measuring your blood pressure is the only way to know if you have hypertension.

In extreme cases, when blood pressure exceeds 180/120 mm Hg, you have a medical emergency known as a hypertensive crisis. Symptoms can include:

Research from 2017 suggests that high blood pressure results from a combination of factors, including genetic, environmental, and behavioral components.

Unlike some diseases with only one or a few genes as risk factors, familial hypertension can result from variations in hundreds of different genes, according to a 2019 study of more than 750,000 individuals. This makes it difficult to pinpoint specific genes that could be treatment targets.

The Centers for Disease Control and Prevention (CDC) also notes that families may affect a persons hypertension risk because of the home environment.

Smoking or even breathing in secondhand smoke can raise blood pressure risks. A diet high in sodium and saturated fat may also cause a blood pressure increase. If physical activity and good sleeping habits arent part of a family dynamic, blood pressure can also be negatively affected.

Monogenic hypertension refers to blood pressure caused by one genetic variant inherited from a parent. Monogenic hypertension accounts for about 30 percent of hypertension cases. Most of those are associated with imbalances of electrolytes, such as potassium.

There are several types of monogenic hypertension syndromes, each with a unique set of origins and symptoms. These include:

Knowing about your family medical history is important for many reasons. A history of certain cancers, for example, may determine when you get screened for those cancers. If high blood pressure runs in your family, its important to share this information with your doctor and regularly monitor your blood pressure.

One way to organize information about your family health history, as well as your own, is to use My Family Health Portrait, an online tool created by the National Institutes of Health. You can gather your family medical history, share it with other relatives, and learn about your risk levels for conditions that tend to run in families.

If your blood pressure is currently at a healthy level, you can make several key lifestyle adjustments to lower the odds of it rising too much. If your blood pressure is higher than usual, these steps, along with medications, may help you bring it back down to a healthy range:

The National Heart, Lung, and Blood Institute developed the Dietary Approaches to Stop Hypertension (DASH) eating plan as a heart-healthy eating strategy.

This plan focuses on managing blood pressure by emphasizing fruits, vegetables, whole grains, lean proteins, and sodium reduction. Its also flexible enough to let people enjoy many of their favorite foods.

Sufficient sleep is essential to good overall health, especially for brain and heart function. Blood pressure is especially susceptible to problems related to poor sleep.

A 2022 study suggests that frequent sleep disturbances and short sleep, or less than 5, 6, or 7 hours, can contribute to hypertension.

Taking steps to improve sleep duration and quality may improve more than just your cardiovascular health. It can also improve your mood, concentration, energy, metabolism, and more.

Hypertension is a major risk factor for cardiovascular disease, the leading cause of death in the United States. High blood pressure is also a leading cause of stroke and a risk factor for chronic kidney disease and other health problems.

If your family medical history includes high blood pressure, start taking steps to lower your risk through heart-healthy behaviors. Even if you dont know your family history or dont have a close relative with hypertension, its still important to take steps to keep your blood pressure under control.

Theres a variety of anti-hypertensive medications that can help. But these medications dont take the place of a healthy diet, exercise, and getting plenty of sleep to help maintain a healthy blood pressure.

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Familial Hypertension: The Genetics of High Blood Pressure - Healthline

Sidney Altman, Who Stumbled on a Breakthrough in Genetics, Dies at 82 – The New York Times

Sidney Altman was born on May 7, 1939, in Montreal, the second son of Victor and Ray (Arlin) Altman. His mother was a textile worker; his father ran a grocery store.

The family had little money, but Dr. Altman, in an autobiographical sketch for the Nobel Institute, credited his parents with setting a good example that stayed with him for the rest of his life. It was from them, he wrote, that I learned that hard work in stable surroundings could yield rewards, even if only in infinitesimally small increments.

Dr. Altman became fascinated by science as a boy first by news of the detonation of the first atomic bomb, when he was 6 years old, and then by seeing the periodic table of the elements, which, he wrote, gave him a sense of the elegance of scientific theory and its predictive power.

He had intended to enroll at McGill University in his hometown, but he changed course when he was accepted by the Massachusetts Institute of Technology. He studied physics at M.I.T., but in his final semester, out of curiosity, he took an introductory course in molecular biology and found it compelling.

After M.I.T., he spent 18 months in a graduate physics program at Columbia University, but he said he was not really happy there. He wanted to be an experimental scientist and there was no opportunity at Columbia, so he quit and went back to Canada.

The next summer, he was offered a job writing about science for an institute in Boulder, where he could also take summer courses.

One night he wound up at a party talking to George Gamow, a well-known physicist, cosmologist and writer. Dr. Altman explained that he was dissatisfied with physics but fascinated with biophysics. Dr. Gamow suggested that he go to the University of Colorado in Denver, which had a good biophysics department.

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Sidney Altman, Who Stumbled on a Breakthrough in Genetics, Dies at 82 - The New York Times

A New Study Found That Conflicts With Your In-Laws Likely Is Due To Genetics – Chip Chick

Struggling to get along with the in-laws has been a phenomenon for centuries. The classic familial conflict has inspired numerous comedy films, self-help books, and ranting Reddit threads.

But, a recent study published in the journal of Evolutionary Psychological Science suggests that the turmoil may be rooted in genetic disposition.

Interestingly, the study first found that both genders experience more conflict with their mothers-in-laws.

In fact, participants reported experiencing five percent more conflict with their mother-in-law than while interacting with their own mothers.

Moreover, most of these disputes involved disagreements over child care or financials.Still, the most intriguing finding relates to the root of these all-too-common quarrels. And the saying mother knows best definitely comes into play.

The research team believes that spouses butt heads with in-laws because people instinctually act in the interest of their genetic kin.

While this might not sound so bad, it can hamper the most universally beneficial decisions and outcomes.

This genetic conflict may cause in-laws to disagree about the distribution of resources and investment, just as we see mothers and fathers disagreeing in these domains, the study reported.

Additionally, these in-law relationships are forced whether they feel that way or not. Much like children have no way of knowing what family they will be born into, spouses and parents alike do not have much say if love is involved.

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A New Study Found That Conflicts With Your In-Laws Likely Is Due To Genetics - Chip Chick

Find your roots through genetics camp at Sanford Research – Sanford Health News

What is more interesting than you? Thats the question that led Sanford PROMISE educators to offer a camp called Finding Your Roots.

This camp is modeled from a summer camp that is offered at Penn State of the same name and is inspired by the PBS TV program hosted by Henry Louis Gates Jr. To offer this experience, Sanford PROMISE formed a partnership with Living DNA, a genetic testing company. Living DNA analyzes DNA samples and provides a unique ancestry report for each student.

Apply now: Finding Your Roots genetics and ancestry camp

This genetics and ancestry camp has been offered every summer since 2020 and is a one-of-a-kind experience for students.

The preparations for this camp start in the spring whencampersare given a DNA collection kit from Living DNA. Theysubmita cheek swab and send it in. Parents of the campers willbe requiredto create an account with Living DNA.During camp, students learn about DNA, genetic technology, evolution, and genetic counseling. Theyparticipatein a series of hands-on experiences that allow them tounderstandthe role of DNAin their body. Aftercampersdevelop this understanding, they are presented with a personalized genetic report.

The personalized reportcontainsthree sections. The first is a section on recent ancestry. It presents a pie chartrepresentingwherethe campersancestors came from. The reportprovidesa brief history of each region present in the campers pie chart. For many campers, thisopensconversation with parents and grandparents about the history of their family.The second section reveals thecampers haplogroup.Haplogroupsare mitochondrial DNA sequence variations that have occurred over more than 150,000 years andalign withthegeographic regions of our earliest ancestors through the maternal line. The third section reveals some unique traits like the preference for cilantro or the tendency to have red hair. We compare their genotype (DNA) with their phenotype (physical trait).No health information is shared through this report.

The goal of Finding Your Roots camp is to learn about DNA by making it personal to the campers. The hope is that the campers will come away from camp with an understanding of where they come from, why they are unique, and how they are connected to all of humankind. Throughout the week, campers will work on a poster called All About Me where they assemble all the information they have learned. At the end of the week, they willpresentin a gallery walktoshare the informationwith invited familymembers and guests.

None of this would be possible without the help of our partners at Living DNA. Located in the United Kingdom, Living DNA is one of the top five global DNA testing firms. Unlike other DNA testing firms, Living DNA does not sell data to any third parties. Read more about their privacy policy. They also offer an online portal to provide more information to the campers and their parents, including control over content features.

This camp is offered to middle school aged students one time during the summer and requires a commitment to submit a DNA sample in the spring. Camp is held at the Sanford PROMISE lab at Sanford Research in Sioux Falls, South Dakota. All PROMISE camps require application and have no fee. If you are interested in applying for this camp, please visit promise.sanfordhealth.org for more information.

Posted In Community, Genetics, Research

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Find your roots through genetics camp at Sanford Research - Sanford Health News

Armidale researchers hope genetic selection will be key to raising steaks with lower emissions – ABC News

Is it possible to breed low-emissioncattle and sheep?

A group of Australian researchers and industry leaders think so and they are putting $19 million towards making it happen.

The University of New England, Armidale (UNE) is collaborating with Angus Australia, Meat and Livestock Australia and the NSW Department of Primary Industry to develop genetics to breed livestock that emits less methane.

The project is in line with the beef industry's goal to reach zero carbon emissions by 2030.

"We have always been keen to look at measuring the traits related to methane emissions on our cattle so in the future we can select Angus bulls that will produce lower methane but still be productive," Angus Australia's general manager for genetic improvementChristian Duffsaid.

Mr Duff said the organisation's involvement in the project was driven by the consumer.

"There is no doubt there is a trend towards people wanting to be aware of where their product comes from and its impact on the environment.

"The way we can have an impact is by making sure we're recording those methane traits on cattle ... and then in the future having information to select bulls."

UNE researchersare confident that, through the project, they can achieve a steady and permanent reduction in methane emissions from livestock.

Two UNEprofessors will investigate how to improve the genetic make-up of sheep and cattle.

Over the next five years, they will measure the methane output of 8,000 cattle and 10,000 sheep living in both feedlot and grazing conditions.

The variation between different animals will be analysed and data used to predict which of those animals have genetics that may lower the emissions they produce.

Associate Professor Sam Clark willresearchthe beef component, and saidboth projects could result in a 25 per cent reduction in methane emissions in livestock by 2050.

"A plausible amount to expect from genetic technologies is about 1 per cent methane reduction per year,"he said.

"The key point about that 1 per cent per year is that, when we use breeding to make that change, it's cumulative and permanent.

"It's a bit like your interest rate for the bank, it just keeps accumulating on top of itself."

The project is scheduled to start laterthis month.

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Armidale researchers hope genetic selection will be key to raising steaks with lower emissions - ABC News

Emognition dataset: emotion recognition with self-reports, facial expressions, and physiology using wearables | Scientific Data – Nature.com

Ethics statement

The study was approved by and performed in accordance with the guidelines and regulations of the Wroclaw Medical University, Poland; approval no. 149/2020. The submission to the Ethical Committee covered, among others, participant consent, research plans, recruitment strategy, data management procedures, and GDPR issues. Participants provided written informed consent, in which they declared that they (1) were informed about the study details, (2) understand what the research involves, (3) understand what their consent was needed for; (4) may refuse to participate in the research at any time during the research project; (5) had the opportunity to ask questions of the experimenter and receive answers to those questions. Finally, participants gave informed consent to participate in the research, agreed to be recorded during the study, and consented to the processing of their personal data to the extent necessary for the implementation of the research project, including sharing their psycho-physiological and behavioral data with other researchers.

The participants were recruited via a paid advertisement on Facebook. Seventy people responded to the advertisement. We have excluded ten non-Polish speaking volunteers. An additional 15 could not find a suitable date, and two did not show up for the scheduled study. As a result, we collected data from 43 participants (21 females) aged between 19 and 29 (M=22.37, SD=2.25). All participants were Polish.

The exclusion criteria were significant health problems, use of drugs and medications that might affect cardiovascular function, prior diagnosis of cardiovascular disease, hypertension, or BMI over 30 (classified as obesity). We asked participants to reschedule if they experienced an illness or a major negative life event. The participants were requested (1) not to drink alcohol and not to take psychoactive drugs 24hours before the study; (2) to refrain from caffeine, smoking, and taking nonprescription medications for two hours before the study; (3) to avoid vigorous exercise and eating an hour before the study. Such measures were undertaken to eliminate factors that could affect cardiovascular function.

All participants provided written informed consent and received a 50 PLN (c.a., $15) online store voucher.

We used short film clips from databases with prior evidence of reliability and validity in eliciting targeted emotions19,20,21,22,23. The source film, selected scene, and stimulus duration are provided in Table 1.

We used two types of self-assessment for manipulation checks that accounted for discrete and dimensional approaches to emotions. For the discrete approach, participants reported retrospectively, using single-item rating scales, on how much of the targeted emotions they had experienced while watching the film clips21. The questionnaire was filled in electronically with a tablet, see Fig.1a. It included nine items corresponding to the selected stimuli. Each emotion-related scale ranged from 1 (not at all) to 5 (extremely). The questionnaire was modeled after the instruments used in previous studies with similar methodology24,25,26,27.

The English version of the self-reports used in the study: (a)questionnaire for discrete emotions; (b)questionnaire for valence, arousal, and motivation. The original Polish version can be found in the Supp. Mat. Fig 3.

For the dimensional approach, participants reported retrospectively, using single-item rating scales, on how much valence, arousal, and motivation they experienced while watching the film clips. The 3-dimensional emotional self-report was collected with the Self-Assessment Manikin SAM28. The SAM is a validated nonverbal visual assessment developed to measure affective responses. Participants reported felt emotions using a graphical scale ranging from 1 (a very sad figure) to 9 (a very happy figure) for valence, Fig.1b; and from 1 (a calm figure) to 9 (an agitated figure) for arousal, Fig.1b. We also asked participants to report their motivational tendency using a validated graphical scale modeled after the SAM29, i.e., whether they felt the urge to avoid or approach while watching the film clips, from 1 (figure leaning backward) to 9 (figure leaning forward)30, Fig.1b. The English versions of the self-reports used in the study are illustrated in Fig.1.

The behavioral and physiological signals were gathered using three wearable devices and a smartphone:

An EEG headband Muse 2 equipped with four EEG electrodes (AF7, AF8, TP9, and TP10), accelerometer (ACC), and gyroscope (GYRO). The data was transmitted to a smartphone in real-time using the Mind Monitor (https://mind-monitor.com) application. At the end of each day, data from the smartphone was transferred to the secure disk;

A wristband Empatica E4 monitoring blood volume pulse (BVP), interbeat interval (IBI), electrodermal activity (EDA), acceleration, and skin temperature (SKT). The Empatica E4 was mounted on the participants dominant hand. The device was connected wirelessly via Bluetooth to the tablet using a custom-made Android application with Empatica E4 link SDK module31. The data was streamed in real-time to the tablet and after the study to the secure server. The signals obtained with the Empatica E4 were synchronized with the stimuli presented on the tablet;

A smartwatch Samsung Galaxy Watch SM-R810 providing heart rate (HR), peak-to-peak interval (PPI), raw BVP the amount of reflected LED light, ACC, GYRO, and rotation data. A custom Tizen application was developed and installed on the watch to collect and store data locally. At the end of each day, data was downloaded to the secure disk;

A smartphone Samsung Galaxy S20+5G recording participants upper-body head, chest, and hands. The footage also included a small mirror reflecting the tablet screen to enable later synchronization with stimuli. At the end of each day, recordings were moved to the encrypted offline disk.

The Muse 2 has lower reliability than medical devices but sufficient for nonclinical trial settings32. It has been successfully used to observe and quantify event-related brain potentials33, as well as to recognize emotions34. The Empatica E4 has been compared with a medical electrocardiograph (ECG), and proved to be a practical and valid tool for studies on HR and heart rate variability (HRV) in stationary conditions35. It was also likewise effective as the Biopac MP150 in the emotion recognition task36. Moreover, we have used the Empatica E4 for intense emotion detection with promising results in a field study37,38. The Samsung Watch devices were successfully utilized (1) to track the atrial fibrillation with an ECG patch as a reference39, and (2) to assess the sleep quality with a medically approved actigraphy device as a baseline40. Moreover, Samsung Watch 3 performed well in detecting intense emotions41.

Additionally, a 10.4-inch tablet Samsung Galaxy Tab S6 was used to guide participants through the study. A dedicated application was developed to instruct the participants, present stimuli, collect self-assessments, as well as gather Empatica E4 signals, and synchronize them with the stimuli.

The sampling rate of the collected signals is provided in Table2. The devices and the experimental stand are illustrated in Fig.2.

Devices used to gather the physiological data and the experimental stand.

The study was conducted between the 16th of July and the 4th of August, 2020. It took place in the UX Wro Lab - a laboratory at the Wrocaw University of Science and Technology. Upon arrival, participants were informed about the experimental procedure, Fig.3. They then signed the written consent. The researcher applied the devices approximately five minutes before the experiment so that the participants could get familiar with them. It also enabled a proper skin temperature measurement. From this stage until the end of the experiment, the physiological signals were recorded. Next, participants listened to instructions about the control questionnaire and self-assessments. The participants filled out the control questionnaire about their activity before the experiment, e.g., time since the last meal or physical activity and wake-up time. Their responses are part of the dataset.

The experiment procedure.

The participants were asked to avoid unnecessary actions or movements (e.g., swinging on the chair) and not to cover their faces. They were also informed that they could skip any film clip or quit the experiment at any moment. Once the procedure was clear to the participants, they were left alone in the room but could ask the researcher for help anytime. For the baseline, participants watched dots and lines on a black screen for 5minutes (physiological baseline) and reported current emotions (emotional baseline) using discrete and dimensional measures. The main part of the experiment consisted of ten iterations of (1) a 2-minute washout clip (dots and lines), (2) the emotional film clip, and (3) two self-assessments, see Fig.3. The order of film clips was counterbalanced using a Latin square, i.e., we randomized clips for the first participant and then shifted by one film clip for each next participant so that the first film clip was placed as the last one.

After the experiment, participants provided information about which movies they had seen before the study and other remarks about the experiment. Concluding the procedure, participants received the voucher. The whole experiment lasted about 50minutes, depending on the time spent on the questionnaires.

Empatica E4 was synchronized with the stimuli out-of-the-box using a custom application and Empatica E4 SDK. Samsung Watch and Muse 2 devices were synchronized using accelerometer signals. All three devices were placed on the table, which was then hit with a fist. The first peak in the ACC signal was used to find the time shift between the devices, Fig.4. All times were synchronized to the Empatica E4 time.

The time difference between the devices used in the study identified by recording the ACC signal when devices were moved according to the synchronization procedure.

Each device stored data in a different format and structure. We unified the data to JSON format and divided the experiment into segments covering washouts, film clips, and self-assessment separately. We provide the raw recordings from all used devices. Additionally, we performed further preprocessing for some devices/data and provide it alongside the raw data.

For EEG, the raw signal represents the signal filtered with a 50Hz notch frequency filter, which is a standard procedure to remove interference caused by power lines. Besides the raw EEG, the Mind Monitor application provides the absolute band power for each channel and five standard frequency ranges (i.e., delta to gamma, see Table2). According to the Mind Monitor documentation, these are obtained by (1) using a fast Fourier transform (FFT) to compute the power spectral density (PSD) for frequencies in each channel, (2) summing the PSDs over a frequency range, and (3) taking the logarithm of the sum, to get the result in Bels (B). The Mind Monitor documentation presents details https://mind-monitor.com.

The processing of BVP signal from the Samsung Watch PPG sensor consisted of subtracting the mean component, eight-level decomposition using Coiflet1 wavelet transform, and then reconstructing it by the inverse wavelet transform based only on the second and third levels. Amplitude fluctuations were reduced by dividing the middle value of the signal by the standard deviation of a one second long sliding window with an odd number of samples. The final step was signal normalization to the range of [1,1].

The upper-body recordings were processed with the OpenFace toolkit42,43,44 (version 2.2.0, default parameters) and Quantum Sense software (Research Edition 2017, Quantum CX, Poland). The OpenFace library provides facial landmark points and action units values, whereas Quantum Sense recognizes basic emotions (neutral, anger, disgust, happiness, sadness, surprise) and head pose.

Some parts of the signals were of lower quality due to the participants movement or improper mounting. For example, the quality of EEG signal can be investigated using Horse Shoe Indicator (HSI) values provided by the device, which represent how well the electrodes fit the participants head. For video clips, OpenFace provides information about detected faces with their head pose per one frame. We have not removed low-quality signals so that users of the dataset can decide how to deal with them. Any data-related problems that we identified are included in the data_completeness.csv file.

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Emognition dataset: emotion recognition with self-reports, facial expressions, and physiology using wearables | Scientific Data - Nature.com

Proteins in Saliva Could Aid in COVID-19 Detection and Predict Severe Illness – University of Utah Health Sciences

Apr 05, 2022 3:00 PM

Author: Julie Kiefer, julie.kiefer@hsc.utah.edu

Reprinted with permission from the American Physiological Society.

Researchers have identified a family of proteins that is significantly elevated in the saliva of patients hospitalized with COVID-19. The proteins, known as ephrin ligands, could potentially serve as a biomarker to help doctors identify patients who are at risk for serious illness.

Ephrins are detectable in saliva samples and could serve as adjunct markersto monitor COVID-19 disease progression, said study author Erika Egal, DVM, PhD, a postdoctoral fellow in the laboratory of Patrice Mimche, PhD, in the Department of Pathology at University of Utah Health in Salt Lake City. We can collect saliva without harm or discomfort for most patients, which can reveal patient responses to COVID-19 and potentially guide care.

Egal presented the findings at the American Physiological Society annual meeting during the Experimental Biology (EB) 2022 meeting, held in Philadelphia April 25.

For the study, researchers analyzed saliva samples collected from patients admitted to the University of Utah Hospital emergency department with respiratory symptoms. Sixty-seven of the patients tested positive for COVID-19 while 64 patients did not. They found that the presence of ephrin ligands in saliva was strongly associated with the diagnosis of severe COVID-19.

Researchers said the study findings could help shed light on the biological processes involved in severe reactions to COVID-19 infection. Previous studies suggest ephrins play a role in injury and inflammation. The scientists say more research is needed to determine whether ephrin concentrations are linked with a higher likelihood of hospitalization, critical illness or death. In addition, as new viral variants emerge, it can be difficult to tell whether existing COVID-19 tests are able to accurately detect infections involving new variants. Looking for ephrins in saliva could offer a simple, non-invasive way to provide corroborating evidence when there is inconsistency between test results and the clinical picture, Egal said.

Saliva is packed with information beyond detecting the COVID-19 infection itself, said Mimche. We demonstrate that immune cells, cytokines and soluble proteins can be reliably measured from saliva samples. Our findings provide a starting point for investigations looking into causal pathways between infection and bad medical outcomes.

The research was overseen by Mimche in collaboration with Theodore Liou, MD and My N. Helms, PhD, from the Department of Internal Medicine at University of Utah Health, as part of a multidisciplinary project to better understand the biology of SARS-CoV-2 and how it causes serious COVID-19 infections.

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About Experimental Biology 2022

Experimental Biology (EB) is the annual meeting of five scientific societies bringing together thousands of scientists and 25 guest societies in one interdisciplinary community. With a mission to share the newest research findings shaping clinical advances, EB offers an unparalleled opportunity to tap into the latest research in anatomy, biochemistry, molecular biology, investigative pathology, pharmacology and physiology.The Experimental Biology 2022 meeting will be held April 25 at the Pennsylvania Convention Center in Philadelphia.www.experimentalbiology.org#expbio

About the American Physiological Society (APS)

Physiology is a broad area of scientific inquiry that focuses on how molecules, cells, tissues and organs function in health and disease. The American Physiological Society connects a global, multidisciplinary community of more than 10,000 biomedical scientists and educators as part of its mission to advance scientific discovery, understand life and improve health. The Society drives collaboration and spotlights scientific discoveries through its 16 scholarly journals and programming that support researchers and educators in their work.http://www.physiology.org

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Proteins in Saliva Could Aid in COVID-19 Detection and Predict Severe Illness - University of Utah Health Sciences

When coronary imaging and physiology are discordant, how best to manage coronary lesions? An appraisal of the clinical evidence – DocWire News

This article was originally published here

Catheter Cardiovasc Interv. 2022 Apr 4. doi: 10.1002/ccd.30186. Online ahead of print.

ABSTRACT

BACKGROUND: Discordant physiology and anatomy may occur when nonsevere angiographic stenosis has positive physiology as well as the opposite situation.

AIM: To underline the reasons behind the discrepancy in physiology and anatomy and to summarize the information that coronary imaging may add to physiology.

METHODS: A review of the published literature on physiology and intravascular imaging assessment of intermediate lesions was carried out.

RESULTS: The limitations of angiography, the possibility of an underlying diffuse disease, the presence of a grey zone in both techniques, the amount of myocardial mass that subtends the stenosis, and plaque vulnerability may play a role in such discrepancy. Intracoronary imaging has a poor diagnostic accuracy compared to physiology. However, it may add information about plaque vulnerability that might be useful in deciding whether to treat or not a certain lesion.

CONCLUSIONS: Coronary revascularization is recommended for patients with ischemia based on physiology. Intracoronary imaging adds information on plaque vulnerability and can help on the decision whether to revascularize or not a lesion.

PMID:35373887 | DOI:10.1002/ccd.30186

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When coronary imaging and physiology are discordant, how best to manage coronary lesions? An appraisal of the clinical evidence - DocWire News