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Neuroscience – University of Miami – Graduate Studies

Neuroscience is the study of how the brain and nervous system function. This scientific area has expanded enormously with technological advances and we are closer than ever to understanding how the brain works. The faculty at the University of Miami are at the forefront of these research areas, using state-of-the-art techniques such as optogenetics, light sheet microscopy and computer-brain interfaces.

The basic and clinical science departments of the University of Miami have a long-standing and internationally recognized record of graduate and postgraduate training in the neurosciences. Our students have access to a large number of dedicated neuroscientists across our three campuses.

The most senior member of my lab has really stepped up as a leader, whether helping out with any questions about my research or coordinating social events for our labit has really created a strong sense of community among our members.

Christine RyanStudentNeuroscience

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Neuroscience - University of Miami - Graduate Studies

Neuroscience – AstraZeneca

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Neuroscience - AstraZeneca

About GENETICS | Genetics

GENETICS is published by the Genetics Society of America, a scholarly society that seeks to deepen our understanding of the living world by advancing our understanding of genetics. Since 1916, GENETICS has published high-quality, original research presenting novel findings bearing on genetics and genomics. The journal publishes empirical studies of organisms ranging from microbes to humans, as well as theoretical work.

While it has an illustrious history, GENETICS has changed along with the communities it serves: it is not your mentor's journal.

The editors make decisions quickly in around 35 days without sacrificing the excellence and scholarship for which the journal has long been known. GENETICS is a peer reviewed, peer-edited journal, with an international reach and increasing visibility and impact. All editorial decisions are made through collaboration of at least two editors who are practicing scientists.

GENETICS is constantly innovating: expanded types of content include Reviews, Commentary (current issues of interest to geneticists), Perspectives (historical), Primers (to introduce primary literature into the classroom), Toolbox Reviews, plus YeastBook, FlyBook, and WormBook . For particularly time-sensitive results, we publish Communications. As part of our mission to serve our communities, we've published thematic collections, including Genomic Prediction, Multiparental Populations, Genetics of Immunity, and Genetics of Sex.

More than just a publisher, the Genetics Society of America is mission-driven and places a high priority on responding to community needs. GENETICS and G3 have long been committed to supporting resources that serve scientists. We were the first journals to partner with Cold Spring Harbor Laboratories to enable seamless deposits of manuscripts from our submission systems straight into the preprint server bioRxiv, as well as from bioRxiv to GENETICS and G3, and we have accepted submissions posted for preprint servers since 2012. Articles feature links to model organism databases like SGD, FlyBase, and WormBase. We have also partnered with Overleaf to provide custom templates for authors who use LaTex, saving them time at submission. Our collaboration with protocols.io, encourages authors to freely share methods from GENETICS articles, helping to increase research reproducibility. The annotation tool Remarq is available on both the GENETICS and G3 websites and allows for collaborative commenting and article sharing. Our latest collaboration with Figshare ensures that supplemental material and data files are permanently associated with an articleand that authors arent limited by file type or size when providing data that support their work. Early online publication means that research investigations are freely accessible and in PubMed within days of acceptance which eliminates delays in discovering the latest science.

For information on the Genetics Society of America, please visit the GSA Home Page.

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About GENETICS | Genetics

Neuroscience News – Brain, Psychology, AI, Neurology and …

Psychology Research - Research on psychology, psychiatry & mental health

Open Access Research - Articles using free, open access neuroscience research

Brain Cancer Research - Research on brain cancers, glioblastomas & tumors

Autism Spectrum Research - Autism Spectrum Disorder research articles

Robotics Research - Research on robots, neural prosthetics, brain machine interfaces and more

Artificial Intelligence Research - Science articles involving AI and robotics news

Deep Learning - Research articles on deep learning topics

Machine Learning - News involving machine learning and big data science research

Alzheimer's Disease Research - Alzheimer's disease research articles

Parkinson's Disease Research - Parkinson's Disease research articles and breakthroughs

Genetics Research - Articles cover genetics, neurogenetics, stem cell research & proteomics

Electrophysiology Research - Patch clamping, extracellular, intracellular recordings of neurons

Neuroethics Research - Articles cover ethics in neuroscience, medicine and cognitive science

Brain Research - Neuroscience articles on brain research

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Neuroscience News - Brain, Psychology, AI, Neurology and ...

Faculty and Research: Cell Biology – UT Southwestern …

The Fiolka lab extends the current imaging capabilities of optical microscopy such that cancer cell research and drug screening can be performed in physiologically relevant, 3D environments, ex vivo and in vivo. The microscope development is focused on improving the spatiotemporal resolution and optical penetration depth and translating the new technologies to biological research.

Our laboratory studies the cell biology of viral-host interactions. Our main focus is on the interplay between RNA viruses, such as influenza A and vesicular stomatitis viruses, and nuclear processes. We investigate interactions of virulence factors with RNA processing and nucleo-cytoplasmic trafficking, which regulate viral replication and antiviral response.

Our lab studies the spatial organization of mitochondria. We are focused on elucidating the molecular mechanisms that govern cristae number and placement along the mitochondrial inner membrane. We are especially interested in how the cell dynamically modulates mitochondrial ultrastructure during shifts in metabolic demand, in different tissues, and under stress conditions.

We use fibroblasts interacting with 3D collagen as a model of fibrous connective tissue to learn about cell behavior in a tissue-like environment. Our research focuses on motile and mechanical interactions between cells and matrix. We analyze these interactions at global and subcellular levels to understand the impact of cell-matrix tension state on cell morphology and mechanical behavior.

Our lab studies how cellular membranes are sculpted during processes like vesicle budding, organelle biogenesis, and the formation of inter-organelle membrane contact sites. We employ both budding yeast and mammalian cell systems to reveal molecular mechanisms of this membrane remodeling, and our main projects use combinations of cell biology, genetics, biochemistry, and structural biology to deeply understand cellular sculpting events.

Our laboratory is interested in the molecular mechanisms governing cytokine receptor signal transduction in hematopoietic stem and progenitor cells, and understanding how deregulation in these mechanisms results in hematological malignancies and cancer.

My research focuses on islet biologyand diabetes. Our long term-goal is to uncover mechanisms and processes thatcontribute to the maintenance of islet cell fitness and function.Currentlywe arestudying ZnT8 in islet cells aiming to understand how Slc30a8 haploinsufficiency protectstype 2 diabetes. We are also developing techniques and probes formonitoring islet beta cell mass or function in vitro and invivo.

Our lab studies the role of adaptor proteins on plasma membrane function in the context of endocytosis and cellular signaling.

Our lab studies why cells utilize primary cilia to organize signaling, and how extracellular inputs are spatio-temporally integrated by these compartments. Studying ciliary signaling also provides a more general paradigm for studying cellular sensory networks in regulating developmental pathways, and disease pathologies.

Our lab studies 3D structures and cell biological functions of macromolecular complexes inside cells, such as molecular motors, microtubules in cilia, and cancer-related nuclear proteins.

We study the mechanisms that govern and regulate clathrin-mediated endocytosis using biochemistry, biophysics, molecular cell biology and quantitative live-cell fluorescence microscopy.

We study the molecular mechanisms governing the function and inheritance of complex cellular organelles. In particular, we are investigating how the single Golgi apparatus is partitioned by the spindle machinery in mitosis as well as the regulatory role of the Golgi in organizing polarity during cell migration.

The Shay/Wright Lab studies the role of telomere biology in aging and cancer, the molecular mechanism of telomere replication and telomerase action, and how to translate these into clinical applications.

Our long-term vision is to create a synthetic cell that recapitulates changes in cytoplasmic state in response to fertilization. Additionally, we aim to understand how cell division errors arise that lead to cancer, developmental defects, and age-related infertility.

The Shay/Wright Lab studies the role of telomere biology in aging and cancer, the molecular mechanism of telomere replication and telomerase action, and how to translate these into clinical applications.

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Faculty and Research: Cell Biology - UT Southwestern ...

Biochemistry, University of Toronto

Exciting opportunities in 7 major research areas.

An international community of faculty and trainees.

Innovative research platforms.

Friday May 3rd 2019, Hart House

Applications are now open!

A challenging research career is waiting for you.

Learn from top researchers.

An internationally recognized career support program.

Seminars, Conferences,& Other Research Events

Biochemistry with a Medical Perspective

Accredited Course!

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Biochemistry, University of Toronto

Biochemistry | Chemistry

BYU Chemistry Graduate Students Brittany Knighton and Naomi Flindt placed first and third at the Three-Minute Thesis (3MT) College Level Competition of the College of Physical and Mathematical Sciences at BYU. Brittany's presentation entitled Coherent Control, which deals with high-field Terahertz spectroscopy, landed her first prize, and the opportunity to represent our college at the university level.

Despite previous setbacks, Rebecca Plimpton lands publication in major science journal.

Dr. Simmons steps down after 17 years as the director of the center. Dr. Steven L. Castle, also from the Department of Chemistry and Biochemistry, will be the center's new associate director.

Komal Kedia, who represented the College of Physical and Mathematica Sciences in BYU's 2014 3MT competition, was recently featured on BYU Radio for her work with Dr. Graves.

Biochemistry is the chemistry of living systems, or the study of what living systems are composed of and how they function at the molecular level. As a discipline, Biochemistry lies at the nexus of Chemistry and Biology, and seeks to understand the physicochemical basis for the traits of life, including metabolism, heredity, and all aspects of physiology and pathophysiology. The science of Biochemistry broadly includes molecular biology, as well as bioorganic, bioinorganic, and biophysical chemistry; and it relates to all biomedical fields including immunology, neurobiology, cancer biology, pharmacology, and developmental biology.

For more information about research in the Andersen Lab and living in Provo, clickhere:The Andersen Lab, Living in Provo. The health of an organism is linked to the tightly regulated balance between cell proliferation and cell death. Any aberrant tilt in this balance can lead to devastating human diseases. For example, excessive proliferation unbalanced by cell death leads to cancer. ...

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Dr. Christensens lab works in the fields of biochemistry and bioanalytical chemistry. His lab develops methods that apply optical spectroscopy, time-lapse microscopy, and other current analytical and biophysical techniques to questions in biochemistry, biophysics, cell and microbiology. A current area of research in my lab grew out of our discovery several years ago that the anthrax toxin receptors capillary morphogenesis ...

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For more information about research in the Graves Lab, clickhere. Serum proteomics to identify biomarkers of human disease. Over the past few years, I (in conjunction with collaborators at the University of Utah Medical School) have explored quantitative differences in serum proteins, peptides, and lipids in pregnant women who went on to experience a preterm birth in their pregnancy compared ...

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Protein engineering to accelerate scientific discovery Currently we are working to develop generalizable protein engineering-based methods to facilitate protein structure determination by X-ray crystallography. Moody laboratory approach X-ray crystallography allows us ...

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Price Lab Group My research explores mechanisms used by living cells to control the synthesis and degradation of protein. Specifically, we use mass spectrometry and stable isotopes to label newly synthesized molecules with a time dependent tag. This allows us to measure both in vivo concentrations, and replacement rate. With a mass spectrometer, the time-dependent stable isotope enrichment can be ...

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Identification of Protein Therapies for Muscular DystrophyThe muscular dystrophies are a group of progressive degenerative muscle wasting diseases that vary in age of onset, phenotype, cause, severity and life span. Many of the treatment options for these diseases have not resulted in substantial quality of life treatment options desperately needed for patients and families. The goal of my lab is ...

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BIOINORGANIC CHEMISTRY Watt Research Lab Group Biological systems require trace amounts of transition metal ions to sustain life. Transition metal ions are required at the active sites of many enzymes for catalytic activity. In fact, transition metals catalyze some of the most energetically demanding reactions in biology. Unfortunately, these highly reactive metal ions also catalyze reactions that are dangerous for ...

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The Willardson Lab Mechanisms of Assembly of Signaling Complexes Most cellular functions are performed by proteins associated together into complexes. In fact, many proteins cannot even exist in the cell without their binding partners. These protein complexes often require the help of other proteins, called chaperones, to bring the complexes together. This is certainly the case for protein complexes involved ...

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Biochemistry | Chemistry

Plant Physiology and Development, Sixth Edition

This website is a companion to the textbook Plant Physiology and Development, Sixth Edition by Lincoln Taiz, Eduardo Zeiger, Ian M. Mller, and Angus Murphy, published by Sinauer Associates.

For each chapter of the textbook, the site includes Web Topics and Web Essays that expand on the books coverage, Study Questions for self-review, and chapter References.

Use the Jump to Chapter menu on the left to access any specific chapter or content category directly.

If you have any problems using this site, or have any suggestions or errors to report, please contact us at support@sinauer.com. Be sure to include the name of this website (Plant Physiology and Development 6e Companion Website) in your message.

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Plant Physiology and Development, Sixth Edition

Biochemistry | IntechOpen

Biochemistry | IntechOpen

Open access peer-reviewed Edited Volume

Over the recent years, biochemistry has become responsible for explaining living processes such that many scientists in the life sciences from agronomy to medicine are engaged in biochemical research. This book contains an overview focusing on the research area of proteins, enzymes, cellular mechanisms and chemical compounds used in relevant approaches. The book deals with basic issues and some of...

Over the recent years, biochemistry has become responsible for explaining living processes such that many scientists in the life sciences from agronomy to medicine are engaged in biochemical research. This book contains an overview focusing on the research area of proteins, enzymes, cellular mechanisms and chemical compounds used in relevant approaches. The book deals with basic issues and some of the recent developments in biochemistry. Particular emphasis is devoted to both theoretical and experimental aspect of modern biochemistry. The primary target audience for the book includes students, researchers, biologists, chemists, chemical engineers and professionals who are interested in biochemistry, molecular biology and associated areas. The book is written by international scientists with expertise in protein biochemistry, enzymology, molecular biology and genetics many of which are active in biochemical and biomedical research. We hope that the book will enhance the knowledge of scientists in the complexities of some biochemical approaches; it will stimulate both professionals and students to dedicate part of their future research in understanding relevant mechanisms and applications of biochemistry.

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The calculation process of the FP behavior inside the reactor building.

Figure 1 shows the process of release of FPs from fuel to cladding, cladding to coolant and then to the containment. In this work, a 1000-MW pressurized water reactor (PWR) has been considered with the design specification as shown in Table 1. The PWR system along with the containment system is shown in Figure 2. We have developed a real-time kinetic model to simulate the FP behavior inside the containment. The analytical model is a set of coupled ordinary differential equations (ODEs). The FP activity inside the reactor containment building and on the surfaces and walls of the containment is governed by the following sets of ODEs [8, 32, 33].

dmv,itdt=imv,itut,iSVmv,itFVmv,itRres,ircVmv,itLrVmv,it+riSVms,it+PitE1

where

=HiIodine3hEa2dotherFPsE2

dmstdt=tmvtrmstE3

where i indicates the isotope, whereas V and S indicate the volumetric and surface activities of ith isotope. The puff release of FP is mv (t)=fxfffpfcAc/V g.m3. The values of various parameters used in these simulations are listed in Table 2.

Design parameters of typical 1000MW reactor [34, 35].

A schematic diagram of a typical PWR system with the containment spray system.

Important parameters used for simulation [36].

Numerical data for spray removal term ([36, 38]).

The last term in Eq. (1) is the source of FP from the reactor pressure vessel. The kinetic source is modeled as [37].

Pt=1fxAcfffpfcKVewxtE4

K=wxwx/Twxwx/TE5

The (1fx) exp.(wxt) is the airborne FP activity released along with the coolant with mixing rate wx. Where K is the normalization constant and expressed as follows. The overall radioactive mass inventory, including kinetic and static parts, is depicted in Eq. (6).

Ac=fxAc+1fxAcB0TewxtdtE6

The removal of iodine and aerosols from the containment with the spray system can be expressed as depicted in Eqs. (7) and (8), where mri and mra are the removal rates of iodine and aerosols, respectively.

dmrI,itdt=PitHiFVmv,itE7

dmra,itdt=Pit3hFEa2dVmv,itE8

where

i=1e6KGtd/dH+KGKLE9

and

KG=DLd2.0+0.60Re0.5Sc0.33E10

KL=22DL3dE11

DL=7.4108xMlTl0.6E12

The values of these parameters in Eqs. (9)(12) are listed in Table 3.

Several steps are involved in the simulation of FP behavior inside the reactor building starting from the generation of FP in fuel along with the fuel burn-up. Leakage of FP into the coolant and then from the coolant to containment along with the leakage of coolant. The computational steps are listed in Figure 3. A two-stage methodology has been adopted: (1) evaluation of activity in the core just before the accident and (2) kinetic quantification of airborne activity under confined conditions. The core activity has been evaluated at for one complete fuel cycle to get maximum core activity. The behavior of airborne FP activity has been quantified for loss of the coolant accident (LOCA) under NUREG-1465 [8] and regulatory guide 1.183 [32] assumptions. The developed model uses subroutine functions containing coupled ODEs and RungeKutta (RK) method. The ODEs (Eqs. (1)(12)) are implemented in MATLAB. The system of ODEs (Eqs. (1), (3), (7), (8)) is coupled and solved numerically using the RungeKutta (RK) method in this program.

Flow chart of incontinent FP source term estimation.

The RK numerical provides efficient time-domain solution, yielding static as well as dynamic values of FPAs corresponding to about 84 different dominant FPs. The computational cycle starts with the initialization of the variables with t=0. In the time loop, the values of FPAs inside the containment building are calculated using RK scheme for each next time step. The program allows performing these calculations for spray system operation.

The above equations can be implemented in MATLAB. The flow chart of the MATLAB program is shown in Figure 4. In the first step, the physical constant and parameters are defined, and the time array and droplet size are determined by the user.

function PWR_Fission_Product

% MATLAB Program for In-containment Fission product program by Khurram Mehboob

% Date : 08-07-2017

%================================================%

clear; clc; clear all;

%================================================

Global Hi Lr V S vd dec r Rr neu EI h Klcm Kgcm d Ea fr H y00 Q y t I Ac D Core_I

Cont_A QQ f x fc B wx YY Sorc wx1

tn = input('Enter end time = tn = '); h = input('Enter stepsize = h = '): t = (0:h:tn); % time array

for d1=100: 100: 1000; % particle diameter (microns)

%=======Control Variables====================

d = d1*1e-4; % particle diameter (cm)

k=d1/100; % Droplet control Factors for printing

fx = 0.20; % activity immediately available in the containment air

fc = 0.35; % core damage fraction.

H =10000; % partition coefficient for iodine

Rr = 4.719; % Recirculation flow rate

Lr = 14.15; % leakage rate

wx = 0.01; % mixing rate

Flow diagram of computer program.

In the second step, the fixed variables are loaded from an input text file. The input text file contains the output data from the ORIGEN2.2 code that contains data for 84 different FPs.

load 'input.txt'

%=======Fixed variables==============

V = input2(1,1); % free volume of the containment

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